Home
|
About
|
Quick Start
|
FAQ
Beta Version 0.1
DHARA is an online index of articles on Ayurveda published in research journals worldwide.
Users Online:
49
Unfiltered
Classified Search
Enter Keyword Below :
Advanced
Science (New York, N.Y.)
2003
Jul
;
(5631)
:0
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Rice Full-Length cDNA Consortium
,
National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team
,
Kikuchi S
,
Satoh K
,
Nagata T
,
Kawagashira N
,
Doi K
,
Kishimoto N
,
Yazaki J
,
Ishikawa M
,
Yamada H
,
Ooka H
,
Hotta I
,
Kojima K
,
Namiki T
,
Ohneda E
,
Yahagi W
,
Suzuki K
,
Li CJ
,
Ohtsuki K
,
Shishiki T
,
Foundation of Advancement of International Science Genome Sequencing & Analysis Group
,
Otomo Y
,
Murakami K
,
Iida Y
,
Sugano S
,
Fujimura T
,
Suzuki Y
,
Tsunoda Y
,
Kurosaki T
,
Kodama T
,
Masuda H
,
Kobayashi M
,
Xie Q
,
Lu M
,
Narikawa R
,
Sugiyama A
,
Mizuno K
,
Yokomizo S
,
Niikura J
,
Ikeda R
,
Ishibiki J
,
Kawamata M
,
Yoshimura A
,
Miura J
,
Kusumegi T
,
Oka M
,
Ryu R
,
Ueda M
,
Matsubara K
,
RIKEN
,
Kawai J
,
Carninci P
,
Adachi J
,
Aizawa K
,
Arakawa T
,
Fukuda S
,
Hara A
,
Hashizume W
,
Hayatsu N
,
Imotani K
,
Ishii Y
,
Itoh M
,
Kagawa I
,
Kondo S
,
Konno H
,
Miyazaki A
,
Osato N
,
Ota Y
,
Saito R
,
Sasaki D
,
Sato K
,
Shibata K
,
Shinagawa A
,
Shiraki T
,
Yoshino M
,
Hayashizaki Y
,
Yasunishi A
Abstract
We collected and completely sequenced 28,469 full-length complementary DNA clones from Oryza sativa L. ssp. japonica cv. Nipponbare. Through homology searches of publicly available sequence data, we assigned tentative protein functions to 21,596 clones (75.86%). Mapping of the cDNA clones to genomic DNA revealed that there are 19,000 to 20,500 transcription units in the rice genome. Protein informatics analysis against the InterPro database revealed the existence of proteins presented in rice but not in Arabidopsis. Sixty-four percent of our cDNAs are homologous to Arabidopsis proteins.
DHARA ID:
D024463
Pubmed ID:
12869764
Access to Full Paper Not Available
Copyright
|
Disclaimer
|
Feedback
|
Updates
|
Contact
Developed and maintained by AVP Research Foundation (Formerly AVT Institute for Advanced Research), 136/137, Trichy Road, Ramanathapuram, Coimbatore - 641045, Tamil Nadu, India
Funded by Central Council for Research in Ayurvedic Sciences, Dept. of AYUSH, Ministry of Health and Family Welfare, Government of India, New Delhi